Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876192.1_cds_XP_016436035.1_31937
CDS Infomation

[gene=LOC107762208] [db_xref=GeneID:107762208] [protein=aspartic proteinase Asp1-like] [protein_id=XP_016436035.1] [location=complement(join(4258..4346,4505..4577,4657..4851,4923..5061,5151..5384,5520..5746,5968..6085,7202..7380))] [gbkey=CDS]
Sequence

ATGAAAGGAAAATGGAAATCACCTTTTTGGGTGCTATTGGTGTTGTACTGTCTACTTCTA
TCTCAGTCGTTTAAGGGATGTTTTTCTGCCTTTAGTCTGCCTCGTCCCTCTTGGAAGAAA
CAGTCCAAATTTGGTTCCTCTCTTGTTTTCCCTCTAGCTGGAAATGTGTATCCTAAAGGG
TATTATCAGGTGACACTCAATGTTGGCCAACCCCCCAAACCTTACTTTCTTGATATAGAC
ACTGGTAGTGATCTCACTTGGCTCCAGTGTGATGCACCTTGTGCCAAATGCACTCCGGCT
CCTCACAGTCTGTACAAACCGAATAAAAATATTGTCAAGTGTAAGGATCCTGTATGTGCA
TCCCTTCACTTGACTGCAAACAATCACTGTCACACCCTTGACGAGCAATGCGACTATGAG
GTTGAGTATGCAGATCATGGTTCGTCGTTGGGAGTTCTGGTCAAAGACGCATTTCCACTA
AGATTCACCAATGGTACTACCGTTGCACCTCCACTAGTGTTTGGTTGCGGGTACGATCAA
GAAGTGCCAGCCTCTACTCGGGCACCTTTTACCGATGGAATTCTTGGTCTAGGAAATGGA
AAATCAAGCGTTCTATCACAGCTGAGTAGCTTGGGTCTTATCCGGAATGTAGTAGGTCAC
TGTTTAAGCGGGCAAGGCGGAGGTTTTCTTTTCTTTGGAGATGATGTCCTCCCGTCTTCT
GGGATTGTTTGGACACCTATTTTGCGTGCATCTTCAGAGAAACACTATTCTTTGGGACCT
GCAGATCTCCTATTCAGTGGGCAGGCAACTGGAATAAAGGGTATACCAATAATTTTTGAC
AGCGGAAGTACTTACAGTTACTTTAATTCTGAAGCATACAAAATTCTAGTGTCTTCGATT
AAGAAAGATGTAAACACAAAGCAGCTGACCGATGCAGTGGACGACAAAAGCTTACCTGTC
TGCTGGAAAGGCTCCAAAAGCTTCAAATCCATTCATGATGCCAAGAGCTTCTTCAAGCCA
TTAACTCTTAGTTTCACAAAAGCTAAAAATGTTCAGCTTCAACTGCCACCCGAGGCCTAT
CTTGTTCGAACTGAGCATGGCAATATATGCTTAGGTATATTGGATGGTACCGACGTTGGA
ATAGGAAATTATAATATCATTGGAGATGTTTCGATGGTAGACAAAATGGTGATCTACGAC
AACGAGAAGCAACAGATTGGTTGGGTTCCAGCAAACTGCAACAAGCTTCCATAG

Peptide Sequence

PEP ID

XP_016436035.1
PEP Infomation

PREDICTED: aspartic proteinase Asp1-like [Nicotiana tabacum]
Sequence

MKGKWKSPFWVLLVLYCLLLSQSFKGCFSAFSLPRPSWKKQSKFGSSLVFPLAGNVYPKG
YYQVTLNVGQPPKPYFLDIDTGSDLTWLQCDAPCAKCTPAPHSLYKPNKNIVKCKDPVCA
SLHLTANNHCHTLDEQCDYEVEYADHGSSLGVLVKDAFPLRFTNGTTVAPPLVFGCGYDQ
EVPASTRAPFTDGILGLGNGKSSVLSQLSSLGLIRNVVGHCLSGQGGGFLFFGDDVLPSS
GIVWTPILRASSEKHYSLGPADLLFSGQATGIKGIPIIFDSGSTYSYFNSEAYKILVSSI
KKDVNTKQLTDAVDDKSLPVCWKGSKSFKSIHDAKSFFKPLTLSFTKAKNVQLQLPPEAY
LVRTEHGNICLGILDGTDVGIGNYNIIGDVSMVDKMVIYDNEKQQIGWVPANCNKLP

Transcript Sequence

Gene sequence data has not been registered.